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  5. Solyc02g080140.4.1

Solyc02g080140.4.1 (Solyc02g080140)


Aliases : Solyc02g080140

Description : no hits & (original description: none)


Gene families : OG0008477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008477_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g080140.4.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Adi_g012537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G022900.1 Ceric.17G022900 not classified & original description: pacid=50617363... 0.04 OrthoFinder output from all 47 species
LOC_Os08g09180.1 LOC_Os08g09180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g18300.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR019367 PDZ-binding_CRIPT 11 94
No external refs found!