Solyc02g079920.3.1 (Solyc02g079920)


Aliases : Solyc02g079920

Description : C2H2 zinc finger transcription factor


Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g079920.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00197580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT5G54630 No alias zinc finger protein-related 0.05 OrthoFinder output from all 47 species
Aev_g16586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54734.t1 Aspi01Gene54734 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33322 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Gb_25842 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Gb_32332 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Gb_36502 BGLU17 sugar efflux transporter (SWEET) 0.04 OrthoFinder output from all 47 species
LOC_Os03g15790.1 LOC_Os03g15790 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g01208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_103943g0010 No alias C2H2 zinc finger transcription factor 0.13 OrthoFinder output from all 47 species
MA_10426153g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_13576g0010 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Mp3g21490.1 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Ore_g04292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014168 No alias not classified & original description: CDS=1-1884 0.03 OrthoFinder output from all 47 species
Smo236040 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.09 OrthoFinder output from all 47 species
Zm00001e008786_P002 Zm00001e008786 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!