1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g079770.3.1

Solyc02g079770.3.1 (Solyc02g079770)


Aliases : Solyc02g079770

Description : RNA editing factor (MORF)


Gene families : OG0008097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008097_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g079770.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00203580 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.05 OrthoFinder output from all 47 species
AMTR_s00067p00179200 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AT1G11430 No alias plastid developmental protein DAG, putative 0.14 OrthoFinder output from all 47 species
GSVIVT01014547001 No alias RNA processing.organelle machineries.RNA... 0.1 OrthoFinder output from all 47 species
GSVIVT01027872001 No alias RNA processing.organelle machineries.RNA... 0.05 OrthoFinder output from all 47 species
Gb_32072 No alias RNA editing factor (MORF) 0.05 OrthoFinder output from all 47 species
LOC_Os04g51280.1 LOC_Os04g51280 RNA editing factor (MORF) 0.19 OrthoFinder output from all 47 species
LOC_Os08g04450.3 LOC_Os08g04450 RNA editing factor (MORF) 0.04 OrthoFinder output from all 47 species
Zm00001e029854_P001 Zm00001e029854 RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
Zm00001e040293_P001 Zm00001e040293 RNA editing factor (MORF) 0.09 OrthoFinder output from all 47 species
Zm00001e041577_P001 Zm00001e041577 RNA editing factor (MORF) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!