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  5. Solyc02g079450.1.1

Solyc02g079450.1.1 (Solyc02g079450)


Aliases : Solyc02g079450

Description : Berberine bridge enzyme-like 23 OS=Arabidopsis thaliana (sp|q9fkv2|bbe23_arath : 479.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 448.6)


Gene families : OG0000307 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g079450.1.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
AT1G30700 No alias FAD-binding Berberine family protein 0.05 OrthoFinder output from all 47 species
AT1G30720 No alias FAD-binding Berberine family protein 0.03 OrthoFinder output from all 47 species
AT5G44360 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from all 47 species
Adi_g059834 MEE23, EDA28 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Als_g21711 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aob_g26795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32306 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Aop_g13004 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene64424.t1 Aspi01Gene64424 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene64456.t1 Aspi01Gene64456 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene68383.t1 Aspi01Gene68383 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70320.t1 Aspi01Gene70320 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene70323.t1 Aspi01Gene70323 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0390.g067663 No alias not classified & original description: CDS=1-906 0.02 OrthoFinder output from all 47 species
Cba_g04545 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Cba_g14534 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ceric.07G064000.1 Ceric.07G064000 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dac_g10956 MEE23, EDA28 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Dac_g16169 MEE23, EDA28 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Dcu_g10857 MEE23, EDA28 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Dde_g48627 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_21185 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Gb_24403 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Gb_24405 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Gb_24416 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
LOC_Os02g14090.1 LOC_Os02g14090 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
LOC_Os06g35560.1 LOC_Os06g35560 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
LOC_Os06g35590.1 LOC_Os06g35590 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
LOC_Os06g35660.1 LOC_Os06g35660 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
LOC_Os06g35700.1 LOC_Os06g35700 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
LOC_Os11g30310.1 LOC_Os11g30310 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Len_g09034 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
MA_10428737g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
Nbi_g41735 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ore_g12602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30060 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ore_g42757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42812 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ore_g42813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21779 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Solyc02g022860.1.1 Solyc02g022860 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Solyc02g070090.1.1 Solyc02g070090 Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g070110.1.1 Solyc02g070110 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 OrthoFinder output from all 47 species
Solyc02g079440.3.1 Solyc02g079440 Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g072660.4.1 Solyc09g072660 Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e014361_P001 Zm00001e014361 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Zm00001e021429_P001 Zm00001e021429 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Zm00001e030681_P001 Zm00001e030681 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
Zm00001e030684_P001 Zm00001e030684 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Zm00001e035614_P001 Zm00001e035614 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Zm00001e040211_P001 Zm00001e040211 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Zm00001e042367_P001 Zm00001e042367 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Zm00001e042369_P001 Zm00001e042369 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 70 207
IPR012951 BBE 475 530
No external refs found!