Solyc02g078540.4.1 (Solyc02g078540)


Aliases : Solyc02g078540

Description : no hits & (original description: none)


Gene families : OG0002188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002188_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g078540.4.1

Target Alias Description ECC score Gene Family Method Actions
AT2G20760 No alias Clathrin light chain protein 0.08 OrthoFinder output from all 47 species
Adi_g059492 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077024 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37421 No alias light chain of clathrin triskelion & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g10177 No alias light chain of clathrin triskelion & original description: none 0.07 OrthoFinder output from all 47 species
Als_g06151 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08248 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08249 No alias light chain of clathrin triskelion & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06413 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00585 No alias light chain of clathrin triskelion & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g45363 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G039600.1 Ceric.36G039600 light chain of clathrin triskelion & original... 0.06 OrthoFinder output from all 47 species
Ceric.38G019700.1 Ceric.38G019700 light chain of clathrin triskelion & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07971 No alias light chain of clathrin triskelion & original description: none 0.14 OrthoFinder output from all 47 species
Ehy_g03560 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g51510.1 LOC_Os06g51510 light chain of clathrin triskelion 0.05 OrthoFinder output from all 47 species
Lfl_g05289 No alias light chain of clathrin triskelion & original description: none 0.06 OrthoFinder output from all 47 species
MA_10435137g0010 No alias light chain of clathrin triskelion 0.03 OrthoFinder output from all 47 species
Mp2g03080.1 No alias light chain of clathrin triskelion 0.06 OrthoFinder output from all 47 species
Msp_g03939 No alias light chain of clathrin triskelion & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g02810 No alias light chain of clathrin triskelion & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30776 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38862 No alias light chain of clathrin triskelion & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c7_10150V3.1 Pp3c7_10150 Clathrin light chain protein 0.03 OrthoFinder output from all 47 species
Smo107473 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Spa_g04777 No alias light chain of clathrin triskelion & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e033442_P001 Zm00001e033442 light chain of clathrin triskelion 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!