Solyc02g077960.3.1 (TMO6, Solyc02g077960)

Aliases : TMO6, Solyc02g077960

Description : transcription factor (DOF)

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g077960.3.1
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00033p00212490	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00058p00210070	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00059p00213350	ADOF1, DOF1,...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
AMTR_s00169p00055880	OBP4,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT1G29160	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT2G28510	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.05	OrthoFinder output from all 47 species
AT2G37590	DOF2.4, ATDOF2.4	DNA binding with one finger 2.4	0.03	OrthoFinder output from all 47 species
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.05	OrthoFinder output from all 47 species
AT3G21270	ADOF2, DOF2	DOF zinc finger protein 2	0.02	OrthoFinder output from all 47 species
AT3G45610	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.07	OrthoFinder output from all 47 species
AT5G60850	OBP4	OBF binding protein 4	0.04	OrthoFinder output from all 47 species
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT5G66940	No alias	Dof-type zinc finger DNA-binding family protein	0.07	OrthoFinder output from all 47 species
Adi_g007394	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g024682	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g056971	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058001	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g069664	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g078316	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g078561	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g106349	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g04769	OBP4	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g06704	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g16804	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g24071	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g39679	CDF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g03761	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20563	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Als_g27376	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g08641	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g67430	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene34893.t1	OBP4, Aspi01Gene34893	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene37574.t1	OBP3, Aspi01Gene37574	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s1074.g096912	TMO6	transcription factor *(DOF) & original description: CDS=1-1176	0.02	OrthoFinder output from all 47 species
Azfi_s4159.g118156	TMO6	transcription factor *(DOF) & original description: CDS=1-876	0.02	OrthoFinder output from all 47 species
Cba_g00291	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g06470	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g39110	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.11G043000.1	TMO6, Ceric.11G043000	transcription factor *(DOF) & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.14G083700.1	OBP4, Ceric.14G083700	transcription factor *(DOF) & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.19G013700.1	TMO6, Ceric.19G013700	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.26G037300.1	TMO6, Ceric.26G037300	transcription factor *(DOF) & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g06526	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g07953	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g31731	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g07485	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g05330	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g02493	OBP4	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g04712	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12009	DOF2.4, ATDOF2.4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g12302	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26839	CDF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01005057001	TMO6	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
GSVIVT01007758001	HCA2, DOF5.6	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01021085001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01024986001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Gb_07177	CDF2	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Gb_28499	TMO6	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os01g09720.1	ADOF2, DOF2,...	transcription factor (DOF)	0.09	OrthoFinder output from all 47 species
LOC_Os01g64590.1	LOC_Os01g64590	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os02g15350.1	LOC_Os02g15350	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os03g07360.1	CDF3, LOC_Os03g07360	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os03g55610.1	ADOF2, DOF2,...	transcription factor (DOF)	0.09	OrthoFinder output from all 47 species
LOC_Os03g60630.1	LOC_Os03g60630	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os04g47990.1	LOC_Os04g47990	transcription factor (DOF)	0.11	OrthoFinder output from all 47 species
LOC_Os05g02150.1	OBP3, LOC_Os05g02150	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os05g36900.1	LOC_Os05g36900	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os08g38220.1	LOC_Os08g38220	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os12g38200.1	LOC_Os12g38200	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Len_g29714	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g01681	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g26281	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
MA_2430g0010	CDF3	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp1g18540.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g32354	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01077	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g03668	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g19321	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g38953	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g05846	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g25217	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g41458	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g10327	No alias	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g16291	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g28297	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g32527	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06804	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g31297	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g61204	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007584	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1335	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008715	TMO6	transcription factor *(DOF) & original description: CDS=1-1413	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1128	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517	CDF3	transcription factor *(DOF) & original description: CDS=154-1659	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020125	No alias	transcription factor *(DOF) & original description: CDS=124-2595	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023228	No alias	transcription factor *(DOF) & original description: CDS=1-1353	0.03	OrthoFinder output from all 47 species
Sam_g43145	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g49468	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Smo29563	OBP4	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Smo89924	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
Solyc03g082840.3.1	DAG1, Solyc03g082840	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Solyc03g112930.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc04g070960.3.1	Solyc04g070960	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc06g076030.3.1	Solyc06g076030	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Spa_g09440	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g26148	CDF1	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g31006	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g20763	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001988_P001	TMO6, Zm00001e001988	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e002951_P002	Zm00001e002951	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e004809_P001	CDF3, Zm00001e004809	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e005107_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Zm00001e005785_P001	ADOF2, DOF2,...	transcription factor (DOF)	0.1	OrthoFinder output from all 47 species
Zm00001e007228_P002	Zm00001e007228	transcription factor (DOF)	0.07	OrthoFinder output from all 47 species
Zm00001e010454_P001	TMO6, Zm00001e010454	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e011750_P002	Zm00001e011750	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e012437_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e015414_P004	Zm00001e015414	transcription factor (DOF)	0.08	OrthoFinder output from all 47 species
Zm00001e015597_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Zm00001e018163_P001	Zm00001e018163	transcription factor (DOF)	0.08	OrthoFinder output from all 47 species
Zm00001e019172_P001	Zm00001e019172	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Zm00001e023218_P004	Zm00001e023218	transcription factor (DOF)	0.07	OrthoFinder output from all 47 species
Zm00001e023334_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e027634_P002	OBP3, Zm00001e027634	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e029641_P001	OBP3, Zm00001e029641	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e031750_P001	Zm00001e031750	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e032133_P001	Zm00001e032133	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e034454_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e035074_P001	TMO6, Zm00001e035074	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Zm00001e041444_P001	Zm00001e041444	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	38	92

External Links

No external refs found!

Solyc02g077960.3.1 (TMO6, Solyc02g077960)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation