Aliases : Solyc02g077650
Description : Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana (sp|q9fnl2|pp418_arath : 619.0)
Gene families : OG0001250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001250_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00022p00130870 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g14580,... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00029p00104100 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g61870,... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00029p00214000 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g09060... | 0.06 | OrthoFinder output from all 47 species | |
AMTR_s00066p00107660 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00111p00140430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g01400,... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00221p00020810 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g16420,... | 0.04 | OrthoFinder output from all 47 species | |
AT1G07740 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.13 | OrthoFinder output from all 47 species | |
AT2G17525 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G09060 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.1 | OrthoFinder output from all 47 species | |
AT3G13150 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G14580 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G48810 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT5G18475 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.15 | OrthoFinder output from all 47 species | |
AT5G46100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.09 | OrthoFinder output from all 47 species | |
AT5G64320 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
Ceric.22G014000.1 | Ceric.22G014000 | not classified & original description: pacid=50615208... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g11618 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01008016001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.1 | OrthoFinder output from all 47 species | |
GSVIVT01011280001 | No alias | Pentatricopeptide repeat-containing protein At5g46100... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01017298001 | No alias | Pentatricopeptide repeat-containing protein At1g80150,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01027435001 | No alias | Pentatricopeptide repeat-containing protein At1g05600... | 0.12 | OrthoFinder output from all 47 species | |
GSVIVT01031218001 | No alias | Pentatricopeptide repeat-containing protein At5g16420,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_00757 | No alias | Pentatricopeptide repeat-containing protein At5g46100... | 0.03 | OrthoFinder output from all 47 species | |
Gb_05553 | No alias | group-II intron mitochondrial splicing factor (MISF74) | 0.04 | OrthoFinder output from all 47 species | |
Gb_07822 | No alias | Pentatricopeptide repeat-containing protein At3g09060... | 0.04 | OrthoFinder output from all 47 species | |
Gb_12002 | No alias | Pentatricopeptide repeat-containing protein At3g48810... | 0.12 | OrthoFinder output from all 47 species | |
Gb_12262 | No alias | Pentatricopeptide repeat-containing protein At3g53700,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_14900 | EMB1025 | Pentatricopeptide repeat-containing protein At4g20090... | 0.1 | OrthoFinder output from all 47 species | |
Gb_21920 | No alias | Pentatricopeptide repeat-containing protein At1g07740,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_23196 | No alias | Pentatricopeptide repeat-containing protein At1g05600... | 0.04 | OrthoFinder output from all 47 species | |
Gb_23263 | No alias | Pentatricopeptide repeat-containing protein At5g46100... | 0.06 | OrthoFinder output from all 47 species | |
Gb_35219 | No alias | Pentatricopeptide repeat-containing protein At5g18475... | 0.04 | OrthoFinder output from all 47 species | |
Gb_37573 | No alias | Pentatricopeptide repeat-containing protein At5g64320,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_38400 | No alias | Pentatricopeptide repeat-containing protein At3g53700,... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g58080.1 | PPR336, LOC_Os01g58080 | PPR-type mitochondrial ribosome regulatory protein (PPR336) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g42210.1 | LOC_Os02g42210 | Pentatricopeptide repeat-containing protein At4g36680,... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g04160.1 | LOC_Os05g04160 | Pentatricopeptide repeat-containing protein At3g48810... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os06g30420.1 | EMB1025, LOC_Os06g30420 | Pentatricopeptide repeat-containing protein At4g20090... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g39050.1 | LOC_Os08g39050 | Pentatricopeptide repeat-containing protein At1g80150,... | 0.06 | OrthoFinder output from all 47 species | |
MA_131324g0010 | No alias | Pentatricopeptide repeat-containing protein At5g18475... | 0.04 | OrthoFinder output from all 47 species | |
MA_137206g0010 | No alias | PPR-type mitochondrial ribosome regulatory protein (PPR336) | 0.05 | OrthoFinder output from all 47 species | |
MA_17644g0010 | No alias | Pentatricopeptide repeat-containing protein At2g17525,... | 0.04 | OrthoFinder output from all 47 species | |
MA_525159g0010 | No alias | Pentatricopeptide repeat-containing protein At1g07740,... | 0.08 | OrthoFinder output from all 47 species | |
MA_57592g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09060... | 0.05 | OrthoFinder output from all 47 species | |
MA_60265g0010 | No alias | Pentatricopeptide repeat-containing protein At5g64320,... | 0.08 | OrthoFinder output from all 47 species | |
MA_71816g0020 | No alias | Pentatricopeptide repeat-containing protein At3g14580,... | 0.06 | OrthoFinder output from all 47 species | |
MA_742945g0010 | No alias | Pentatricopeptide repeat-containing protein At5g16420,... | 0.06 | OrthoFinder output from all 47 species | |
MA_80720g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
Ore_g27863 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0044.g012950 | No alias | not classified & original description: CDS=1-1968 | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g068470.3.1 | Solyc11g068470 | group-II intron mitochondrial splicing factor (MISF74) | 0.09 | OrthoFinder output from all 47 species | |
Solyc12g014330.1.1 | Solyc12g014330 | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
Solyc12g035170.3.1 | Solyc12g035170 | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e015190_P001 | Zm00001e015190 | Pentatricopeptide repeat-containing protein At2g18520,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e019591_P001 | PPR336, Zm00001e019591 | PPR-type mitochondrial ribosome regulatory protein (PPR336) | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e027557_P001 | Zm00001e027557 | Pentatricopeptide repeat-containing protein At3g48810... | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e028732_P001 | Zm00001e028732 | Pentatricopeptide repeat-containing protein At3g09060... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e034625_P001 | Zm00001e034625 | Putative pentatricopeptide repeat-containing protein... | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 293 | 323 |
IPR002885 | Pentatricopeptide_repeat | 325 | 357 |
IPR002885 | Pentatricopeptide_repeat | 153 | 203 |
IPR002885 | Pentatricopeptide_repeat | 224 | 273 |
IPR002885 | Pentatricopeptide_repeat | 93 | 116 |
IPR002885 | Pentatricopeptide_repeat | 411 | 439 |
IPR002885 | Pentatricopeptide_repeat | 377 | 402 |
No external refs found! |