1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g077390.2.1

Solyc02g077390.2.1 (STIP, HB-3, WOX9,...)


Aliases : STIP, HB-3, WOX9, Solyc02g077390

Description : transcription factor (WOX)


Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g077390.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00122680 WOX1,... RNA biosynthesis.transcriptional activation.HB... 0.06 OrthoFinder output from all 47 species
AMTR_s00021p00189010 STIP, HB-3,... RNA biosynthesis.transcriptional activation.HB... 0.11 OrthoFinder output from all 47 species
AMTR_s00023p00181320 WOX3, PRS1, PRS,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AT1G46480 WOX4 WUSCHEL related homeobox 4 0.04 OrthoFinder output from all 47 species
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G17950 WUS, PGA6, WUS1 Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G33880 STIP, HB-3, WOX9 homeobox-3 0.05 OrthoFinder output from all 47 species
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.02 OrthoFinder output from all 47 species
AT5G46010 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g053615 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077524 STPL, WOX8 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49578.t1 STPL, WOX8,... WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63553.t1 STPL, WOX8,... WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63553.t2 STPL, WOX8,... WOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0051.g031311 WUS, PGA6, WUS1 WOX-type transcription factor & original description: CDS=1-912 0.03 OrthoFinder output from all 47 species
Azfi_s0078.g038164 STPL, WOX8 WOX-type transcription factor & original description: CDS=39-1451 0.03 OrthoFinder output from all 47 species
Cba_g56939 STPL, WOX8 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G009200.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z063700.1 WOX4, Ceric.1Z063700 WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G012000.1 WUS, PGA6, WUS1,... WOX-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g07674 PFS2, HOS9, WOX6 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008424001 WOX1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01009453001 WOX4 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Gb_27283 WOX3, PRS1, PRS transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
LOC_Os01g63510.1 WOX5, LOC_Os01g63510 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
LOC_Os04g56780.1 WUS, PGA6, WUS1,... transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
MA_921642g0010 WOX1 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Nbi_g11122 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014086 STPL, WOX8 WOX-type transcription factor & original description: CDS=1-2016 0.02 OrthoFinder output from all 47 species
Spa_g29226 STPL, WOX8 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006644_P002 WUS, PGA6, WUS1,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Zm00001e009121_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Zm00001e024169_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.12 OrthoFinder output from all 47 species
Zm00001e024170_P001 Zm00001e024170 WUSCHEL-related homeobox 3B OS=Zea mays... 0.1 OrthoFinder output from all 47 species
Zm00001e029534_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Zm00001e032433_P003 STIP, HB-3,... transcription factor (WOX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 49 109
No external refs found!