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  5. Solyc02g077280.4.1

Solyc02g077280.4.1 (Solyc02g077280)


Aliases : Solyc02g077280

Description : GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana (sp|q8vz74|era_arath : 510.0)


Gene families : OG0006143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g077280.4.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT5G66470 No alias RNA binding;GTP binding 0.09 OrthoFinder output from all 47 species
Ala_g22081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009893 No alias not classified & original description: CDS=1-903 0.04 OrthoFinder output from all 47 species
Ceric.25G026200.1 Ceric.25G026200 not classified & original description: pacid=50594372... 0.04 OrthoFinder output from all 47 species
Dde_g10149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018924001 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
Gb_05092 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os05g49220.1 LOC_Os05g49220 GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.07 OrthoFinder output from all 47 species
MA_124092g0010 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Mp2g20310.1 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.1 OrthoFinder output from all 47 species
Ore_g28699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007350 No alias not classified & original description: CDS=95-1276 0.06 OrthoFinder output from all 47 species
Smo75698 No alias GTPase ERA1, chloroplastic OS=Zea mays 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR004044 KH_dom_type_2 343 420
IPR006073 GTP-bd 143 260
No external refs found!