1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g077170.3.1

Solyc02g077170.3.1 (Solyc02g077170)


Aliases : Solyc02g077170

Description : Factor of DNA methylation 1 OS=Arabidopsis thaliana (sp|q9s9p3|fdm1_arath : 149.0)


Gene families : OG0002563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002563_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g077170.3.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G15910 No alias XH/XS domain-containing protein 0.03 OrthoFinder output from all 47 species
Ala_g27746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04691 RDM12, IDN2 regulatory protein of DNA methylation pathway *(IDN/IDP)... 0.02 OrthoFinder output from all 47 species
Dde_g19873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010889001 No alias Chromatin organisation.DNA methylation.canonical... 0.04 OrthoFinder output from all 47 species
GSVIVT01016528001 RDM12, IDN2 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
LOC_Os01g44230.1 RDM12, IDN2,... IDN/IDP regulatory protein of DNA methylation pathway 0.03 OrthoFinder output from all 47 species
MA_16249g0010 No alias Factor of DNA methylation 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011557 RDM12, IDN2 regulatory protein of DNA methylation pathway *(IDN/IDP)... 0.03 OrthoFinder output from all 47 species
Solyc03g117040.3.1 Solyc03g117040 IDN/IDP regulatory protein of DNA methylation pathway 0.04 OrthoFinder output from all 47 species
Spa_g01972 RDM12, IDN2 regulatory protein of DNA methylation pathway *(IDN/IDP)... 0.03 OrthoFinder output from all 47 species
Spa_g06555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005379 FDM1-5/IDN2_XH 180 309
No external refs found!