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  5. Solyc02g075630.3.1

Solyc02g075630.3.1 (Solyc02g075630)


Aliases : Solyc02g075630

Description : UPF0183 protein At3g51130 OS=Arabidopsis thaliana (sp|q9sd33|u183_arath : 351.0)


Gene families : OG0004809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004809_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g075630.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g085756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G071700.1 Ceric.24G071700 not classified & original description: pacid=50628914... 0.03 OrthoFinder output from all 47 species
Dcu_g03790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018824001 No alias UPF0183 protein At3g51130 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_08290 No alias UPF0183 protein At3g51130 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g49990.2 LOC_Os06g49990 UPF0183 protein At3g51130 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g48030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo46185 No alias UPF0183 protein At3g51130 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g12177 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005373 PHAF1 11 205
No external refs found!