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  5. Solyc02g071250.3.1

Solyc02g071250.3.1 (SSP4, Solyc02g071250)


Aliases : SSP4, Solyc02g071250

Description : RNA polymerase-II phosphatase. subcluster B phosphatase


Gene families : OG0000687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g071250.3.1

CladeTarget Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00099670 SSP5,... Protein modification.dephosphorylation.aspartate-based... 0.03 OrthoFinder output from all 47 species
AT4G18140 SSP4b SCP1-like small phosphatase 4b 0.06 OrthoFinder output from all 47 species
AT5G46410 SSP4 SCP1-like small phosphatase 4 0.09 OrthoFinder output from all 47 species
Adi_g015288 SSP5 subcluster B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04903.t1 SSP5, Aspi01Gene04903 subcluster B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71737.t2 SSP5, Aspi01Gene71737 subcluster B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G021200.1 SSP5, Ceric.33G021200 subcluster B phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01021382001 SSP4 Protein modification.dephosphorylation.aspartate-based... 0.04 OrthoFinder output from all 47 species
Len_g08469 SSP5 subcluster B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08470 SSP5 subcluster B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13472 SSP5 subcluster B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018354 SSP5 subcluster B phosphatase & original description: CDS=45-1544 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0221.g026198 SSP5 subcluster B phosphatase & original description: CDS=942-2699 0.02 OrthoFinder output from all 47 species
Sam_g06488 No alias subcluster B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17993 SSP5 subcluster B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55893 SSP5 subcluster B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027927_P003 SSP4, Zm00001e027927 RNA polymerase-II phosphatase. subcluster B phosphatase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 308 468
No external refs found!