Solyc02g070540.3.1 (Solyc02g070540)


Aliases : Solyc02g070540

Description : no hits & (original description: none)


Gene families : OG0003264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003264_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g070540.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00141p00085330 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00141p00087130 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G29980 No alias Protein of unknown function, DUF642 0.03 OrthoFinder output from all 47 species
AT1G80240 No alias Protein of unknown function, DUF642 0.04 OrthoFinder output from all 47 species
AT2G41800 No alias Protein of unknown function, DUF642 0.05 OrthoFinder output from all 47 species
AT2G41810 No alias Protein of unknown function, DUF642 0.04 OrthoFinder output from all 47 species
AT4G32460 No alias Protein of unknown function, DUF642 0.04 OrthoFinder output from all 47 species
Cba_g55088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033286001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_04470 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_14930 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g34690.1 LOC_Os01g34690 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g42520.1 LOC_Os01g42520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g55190.1 LOC_Os01g55190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g11040.1 LOC_Os02g11040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g59300.1 LOC_Os03g59300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g41710.1 LOC_Os04g41710 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g41740.1 LOC_Os04g41740 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g41750.1 LOC_Os04g41750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g04050.1 LOC_Os07g04050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_109913g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_44504g0020 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_770477g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g087540.4.1 Solyc01g087540 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc08g067030.3.1 Solyc08g067030 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007711_P001 Zm00001e007711 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e007713_P001 Zm00001e007713 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e013973_P001 Zm00001e013973 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e020676_P001 Zm00001e020676 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e041141_P001 Zm00001e041141 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR006946 DGR2-like_dom 200 366
IPR006946 DGR2-like_dom 32 188
No external refs found!