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  5. Solyc02g070010.1.1

Solyc02g070010.1.1 (EMB975, Solyc02g070010)


Aliases : EMB975, Solyc02g070010

Description : Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana (sp|q5xet4|pp142_arath : 450.0)


Gene families : OG0008849 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008849_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g070010.1.1
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Ehy_g11412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 239 265
IPR002885 Pentatricopeptide_repeat 366 423
No external refs found!