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  5. AMTR_s00067p00062020

AMTR_s00067p00062020 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.38

Description : RNA biosynthesis.transcriptional activation.JUMONJI transcription factor


Gene families : OG_01_0001111 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001111_tree ,
OG_02_0001701 (LandPlants) Phylogenetic Tree(s): OG_02_0001701_tree ,
OG_03_0001587 (SeedPlants) Phylogenetic Tree(s): OG_03_0001587_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00062020
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AT1G08620 PKDM7D Transcription factor jumonji (jmj) family protein / zinc... 0.02 Archaeplastida
Cre12.g514250 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.01 Archaeplastida
GSVIVT01028351001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 Archaeplastida
Gb_09731 No alias transcription factor (JUMONJI) 0.03 Archaeplastida
Gb_26073 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.02 Archaeplastida
Zm00001e030938_P001 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.04 Archaeplastida
AT1G08620 PKDM7D Transcription factor jumonji (jmj) family protein / zinc... 0.02 LandPlants
GSVIVT01028351001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 LandPlants
Zm00001e030938_P001 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.04 LandPlants
AT1G08620 PKDM7D Transcription factor jumonji (jmj) family protein / zinc... 0.02 SeedPlants
GSVIVT01028351001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 SeedPlants
Gb_27431 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 SeedPlants
Solyc04g009990.3.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.03 SeedPlants
Zm00001e030938_P001 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003889 FYrich_C 1092 1179
IPR004198 Znf_C5HC2 602 652
IPR003347 JmjC_dom 379 495
IPR003888 FYrich_N 1044 1088
IPR003349 JmjN 135 168
No external refs found!