1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g069200.3.1

Solyc02g069200.3.1 (ATIRT1, IRT1, Solyc02g069200)


Aliases : ATIRT1, IRT1, Solyc02g069200

Description : metal cation transporter (ZIP)


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g069200.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00045670 ATZIP6, ZIP6,... Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00182850 ZIP7,... Solute transport.carrier-mediated transport.ZIP... 0.01 OrthoFinder output from all 47 species
AMTR_s00062p00183460 ZIP1,... Solute transport.carrier-mediated transport.ZIP... 0.04 OrthoFinder output from all 47 species
AT1G05300 ZIP5 zinc transporter 5 precursor 0.03 OrthoFinder output from all 47 species
AT1G60960 IRT3, ATIRT3 iron regulated transporter 3 0.05 OrthoFinder output from all 47 species
AT2G32270 ZIP3 zinc transporter 3 precursor 0.04 OrthoFinder output from all 47 species
AT3G12750 ZIP1 zinc transporter 1 precursor 0.05 OrthoFinder output from all 47 species
AT4G19680 IRT2, ATIRT2 iron regulated transporter 2 0.06 OrthoFinder output from all 47 species
AT4G19690 ATIRT1, IRT1 iron-regulated transporter 1 0.08 OrthoFinder output from all 47 species
Aev_g18733 IRT3, ATIRT3 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06465 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27419.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G073300.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.14G032100.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G032200.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G032300.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G032400.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000475.13 No alias Solute transport.carrier-mediated transport.ZIP... 0.01 OrthoFinder output from all 47 species
Dac_g35439 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31389 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014337001 ATIRT1, IRT1 Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
GSVIVT01015882001 ZIP5 Solute transport.carrier-mediated transport.ZIP... 0.04 OrthoFinder output from all 47 species
GSVIVT01032785001 ATZIP6, ZIP6 Solute transport.carrier-mediated transport.ZIP... 0.04 OrthoFinder output from all 47 species
Gb_00356 ATZIP6, ZIP6 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Gb_39061 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
Gb_39062 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os03g46454.1 ZIP10, LOC_Os03g46454 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
LOC_Os03g46470.1 ZIP10, LOC_Os03g46470 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g52310.1 ZIP1, LOC_Os04g52310 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
LOC_Os07g12890.1 ZIP1, LOC_Os07g12890 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Len_g36026 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36027 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18185 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g28648 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10690 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29455 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17347 ZIP7 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17001 No alias metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo91749 ZIP1 Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
Solyc05g053370.3.1 ATZIP6, ZIP6,... metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
Solyc07g043230.3.1 ZIP3, Solyc07g043230 metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
Tin_g18046 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005195_P002 ZIP10, Zm00001e005195 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Zm00001e006961_P001 ZIP1, Zm00001e006961 metal cation transporter (ZIP) 0.01 OrthoFinder output from all 47 species
Zm00001e031284_P002 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e033157_P001 ZIP5, Zm00001e033157 metal cation transporter (ZIP) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 47 347
No external refs found!