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  5. Solyc02g069080.4.1

Solyc02g069080.4.1 (Solyc02g069080)


Aliases : Solyc02g069080

Description : component EXO84 of Exocyst complex


Gene families : OG0001285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g069080.4.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00092390 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.Exocyst... 0.03 OrthoFinder output from all 47 species
Adi_g112861 EXO84B component *(EXO84) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z000400.1 EXO84B, Ceric.1Z000400 component *(EXO84) of Exocyst complex & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01012095001 No alias Vesicle trafficking.target membrane tethering.Exocyst... 0.03 OrthoFinder output from all 47 species
LOC_Os07g38060.1 LOC_Os07g38060 component EXO84 of Exocyst complex 0.06 OrthoFinder output from all 47 species
Lfl_g06709 EXO84B component *(EXO84) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010660 EXO84B component *(EXO84) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e011836_P002 EXO84B, Zm00001e011836 component EXO84 of Exocyst complex 0.02 OrthoFinder output from all 47 species
Zm00001e035284_P001 Zm00001e035284 component EXO84 of Exocyst complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032403 Exo84_C 141 344
No external refs found!