Solyc02g067640.3.1 (Solyc02g067640)

Aliases : Solyc02g067640

Description : Polygalacturonase OS=Prunus persica (sp|p48979|pglr_prupe : 479.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 242.1)

Gene families : OG0008809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008809_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g067640.3.1
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00031370	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.03	OrthoFinder output from all 47 species
AMTR_s00066p00135670	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.02	OrthoFinder output from all 47 species
AMTR_s00074p00182020	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AMTR_s04606p00004600	evm_27.TU.AmTr_v1...	Polygalacturonase OS=Prunus persica	0.03	OrthoFinder output from all 47 species
AT1G65570	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
GSVIVT01004007001	No alias	Polygalacturonase OS=Prunus persica	0.03	OrthoFinder output from all 47 species
GSVIVT01038243001	No alias	Polygalacturonase OS=Prunus persica	0.03	OrthoFinder output from all 47 species
LOC_Os01g43490.1	LOC_Os01g43490	Polygalacturonase OS=Prunus persica...	0.04	OrthoFinder output from all 47 species
LOC_Os11g14410.1	LOC_Os11g14410	Polygalacturonase OS=Prunus persica...	0.04	OrthoFinder output from all 47 species
Solyc12g019180.2.1	Solyc12g019180	Polygalacturonase OS=Prunus persica...	0.05	OrthoFinder output from all 47 species
Solyc12g019220.1.1	Solyc12g019220	Polygalacturonase OS=Prunus persica...	0.04	OrthoFinder output from all 47 species
Zm00001e019002_P001	Zm00001e019002	Polygalacturonase OS=Prunus persica...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0008272	sulfate transport	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0033897	ribonuclease T2 activity	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0072348	sulfur compound transport	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	50	376

External Links

No external refs found!

Solyc02g067640.3.1 (Solyc02g067640)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation