Solyc02g067540.3.1 (Solyc02g067540)


Aliases : Solyc02g067540

Description : no hits & (original description: none)


Gene families : OG0005430 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005430_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g067540.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00240660 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G28460 No alias methyltransferases 0.17 OrthoFinder output from all 47 species
Adi_g016620 No alias RsmD-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13864 No alias RsmD-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0107.g045098 No alias RsmD-type rRNA methyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G002400.1 Ceric.26G002400 RsmD-type rRNA methyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Cre13.g566300 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g14054 No alias RsmD-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032566001 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os03g52640.2 LOC_Os03g52640 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Lfl_g01027 No alias RsmD-type rRNA methyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Mp3g18100.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Sam_g19713 No alias RsmD-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012081_P002 Zm00001e012081 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!