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  5. Solyc02g064730.3.1

Solyc02g064730.3.1 (Solyc02g064730)


Aliases : Solyc02g064730

Description : Uncharacterized protein At2g23090 OS=Arabidopsis thaliana (sp|o64818|y2309_arath : 97.8)


Gene families : OG0004227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g064730.3.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT2G23090 No alias Uncharacterised protein family SERF 0.03 OrthoFinder output from all 47 species
Ala_g28878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000150001 No alias Uncharacterized protein At2g23090 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_03649 No alias Uncharacterized protein At2g23090 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os07g02340.1 LOC_Os07g02340 Uncharacterized protein At2g23090 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp6g10910.1 No alias Uncharacterized protein At2g23090 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Msp_g11919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0070469 respirasome IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:1905037 autophagosome organization IEP HCCA
InterPro domains Description Start Stop
IPR039438 At2g23090-like_Znf 38 75
IPR007513 SERF-like_N 3 36
No external refs found!