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  5. LOC_Os03g21240.1

LOC_Os03g21240.1


Description : PHR1 transcription factor involved in proline synthesis regulation. G2-like GARP transcription factor. transcription factor (PHR1)


Gene families : OG_01_0000027 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000027_tree ,
OG_02_0000069 (LandPlants) Phylogenetic Tree(s): OG_02_0000069_tree ,
OG_03_0000042 (SeedPlants) Phylogenetic Tree(s): OG_03_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g21240.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00025p00224230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G14600 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G02060 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT2G06020 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
GSVIVT01032776001 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Gb_06138 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_27262 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os02g07770.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c23_19680V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c8_16910V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Smo405704 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc04g008480.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc11g022470.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc12g006280.3.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc12g017370.3.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e027318_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e034056_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e035893_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e041868_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
AMTR_s00142p00049490 evm_27.TU.AmTr_v1... Nutrient uptake.phosphorus assimilation.phosphate... 0.02 LandPlants
AT3G04030 No alias Homeodomain-like superfamily protein 0.02 LandPlants
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
Gb_27262 No alias G2-like GARP transcription factor 0.04 LandPlants
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.06 LandPlants
MA_118174g0010 No alias G2-like GARP transcription factor 0.02 LandPlants
Solyc05g007890.4.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc12g017370.3.1 No alias G2-like GARP transcription factor 0.03 LandPlants
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.02 LandPlants
Zm00001e027318_P001 No alias G2-like GARP transcription factor 0.04 LandPlants
Zm00001e035893_P001 No alias G2-like GARP transcription factor 0.04 LandPlants
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.04 LandPlants
AT3G04030 No alias Homeodomain-like superfamily protein 0.02 SeedPlants
MA_100658g0020 No alias no hits & (original description: none) 0.02 SeedPlants
MA_118174g0010 No alias G2-like GARP transcription factor 0.02 SeedPlants
Solyc05g007890.4.1 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e027318_P001 No alias G2-like GARP transcription factor 0.02 SeedPlants
Zm00001e031978_P001 No alias G2-like GARP transcription factor 0.02 SeedPlants
Zm00001e035893_P001 No alias G2-like GARP transcription factor 0.04 SeedPlants
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 299 346
IPR001005 SANT/Myb 218 269
No external refs found!