LOC_Os10g33730 (Os10g0477200)


Aliases : Os10g0477200

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Encodes a chloroplast RNA editing factor. ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84)


Gene families : OG_01_0014108 (Gene family) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os10g33730
Cluster HCCA cluster: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Zm00001d014035 GRMZM2G368755 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 167 207
IPR002885 Pentatricopeptide_repeat 469 494
IPR002885 Pentatricopeptide_repeat 369 390
IPR032867 DYW_dom 577 689
IPR002885 Pentatricopeptide_repeat 394 441
IPR002885 Pentatricopeptide_repeat 8 54
IPR002885 Pentatricopeptide_repeat 108 157
IPR002885 Pentatricopeptide_repeat 292 334
No external refs found!