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Aliases : ATU2AF65A, Solyc02g062920
Description : large subunit of U2AF pre-RNA splicing auxiliary factor complex
Gene families : OG0000716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000716_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00267190 | ATU2AF65A,... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g022172 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g039505 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g19958 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02552 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07361 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g10024 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g38682 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g13589 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11505 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g12279 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g31028 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g62267 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000618 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023719 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0262.g060793 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g12276 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g21572 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g38521 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G010500.1 | ATU2AF65A,... | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.30G061500.1 | Ceric.30G061500 | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.34G068300.1 | Ceric.34G068300 | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021464.4 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cre09.g391949 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g03340 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g05606 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g48783 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g11336 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018993001 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_05562 | ATHSP70, HSP70 | Probable mediator of RNA polymerase II transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_22808 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18282 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g20231 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30816 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g19286 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g19287 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429502g0010 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | OrthoFinder output from all 47 species | |
| MA_96898g0010 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g18430.1 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g18910.1 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g18656 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g35208 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g25881 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g32508 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g25869 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g32452 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06430 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g35948 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g63646 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0042.g012787 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g09275 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26330 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26815 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g40637 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04427 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g15594 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18763 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g26890 | ATU2AF65A | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g03341 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05158 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g15579 | No alias | large subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e021000_P006 | Zm00001e021000 | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021119_P005 | ATU2AF65A, Zm00001e021119 | large subunit of U2AF pre-RNA splicing auxiliary factor complex | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006528 | asparagine metabolic process | IEP | HCCA |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| CC | GO:0031011 | Ino80 complex | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | HCCA |
| CC | GO:0097346 | INO80-type complex | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| CC | GO:1904949 | ATPase complex | IEP | HCCA |
| No external refs found! |