AMTR_s00067p00056670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.33

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.CDC5/MAC1 component


Gene families : OG_01_0003252 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003252_tree ,
OG_02_0003723 (LandPlants) Phylogenetic Tree(s): OG_02_0003723_tree ,
OG_03_0009005 (SeedPlants) Phylogenetic Tree(s): OG_03_0009005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00056670
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT1G09770 ATCDC5, ATMYBCDC5, CDC5 cell division cycle 5 0.06 Archaeplastida
GSVIVT01023526001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
GSVIVT01023527001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 Archaeplastida
Gb_05612 No alias transcription factor (MYB). transcription factor... 0.02 Archaeplastida
MA_115846g0010 No alias transcription factor (MYB). transcription factor... 0.02 Archaeplastida
Mp1g10310.1 No alias transcription factor (MYB). transcription factor... 0.05 Archaeplastida
Pp3c3_17580V3.1 No alias cell division cycle 5 0.02 Archaeplastida
Solyc04g009950.3.1 No alias transcription factor (MYB). transcription factor... 0.06 Archaeplastida
Zm00001e018784_P002 No alias transcription factor (MYB). transcription factor... 0.05 Archaeplastida
AT1G09770 ATCDC5, ATMYBCDC5, CDC5 cell division cycle 5 0.04 LandPlants
GSVIVT01023526001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 LandPlants
Mp1g10310.1 No alias transcription factor (MYB). transcription factor... 0.03 LandPlants
Pp3c3_17580V3.1 No alias cell division cycle 5 0.02 LandPlants
Solyc04g009950.3.1 No alias transcription factor (MYB). transcription factor... 0.04 LandPlants
Zm00001e018784_P002 No alias transcription factor (MYB). transcription factor... 0.02 LandPlants
AT1G09770 ATCDC5, ATMYBCDC5, CDC5 cell division cycle 5 0.04 SeedPlants
Solyc04g009950.3.1 No alias transcription factor (MYB). transcription factor... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021786 Cdc5p/Cef1_C 338 732
No external refs found!