Solyc02g062170.3.1 (Solyc02g062170)


Aliases : Solyc02g062170

Description : no hits & (original description: none)


Gene families : OG0005152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005152_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g062170.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00053870 evm_27.TU.AmTr_v1... No description available 0.12 OrthoFinder output from all 47 species
AT3G51230 No alias BEST Arabidopsis thaliana protein match is:... 0.13 OrthoFinder output from all 47 species
Adi_g016515 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g38808 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g12208 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g51690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08206 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g63946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene00922.t1 Aspi01Gene00922 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene61927.t1 Aspi01Gene61927 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0247.g060098 No alias not classified & original description: CDS=147-1268 0.03 OrthoFinder output from all 47 species
Ceric.11G031400.1 Ceric.11G031400 not classified & original description: pacid=50595031... 0.08 OrthoFinder output from all 47 species
Ceric.1Z073500.1 Ceric.1Z073500 not classified & original description: pacid=50586247... 0.12 OrthoFinder output from all 47 species
Dcu_g03833 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g24042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018782001 No alias No description available 0.16 OrthoFinder output from all 47 species
Gb_14634 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os10g42660.1 LOC_Os10g42660 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Len_g13480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15733 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g25652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_27772g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_954115g0010 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Mp3g15450.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g07779 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g38054 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g30180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013080 No alias not classified & original description: CDS=50-1519 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022209 No alias not classified & original description: CDS=13-852 0.04 OrthoFinder output from all 47 species
Sam_g14110 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g40625 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g41301 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e002472_P001 Zm00001e002472 no hits & (original description: none) 0.19 OrthoFinder output from all 47 species
Zm00001e012997_P002 Zm00001e012997 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!