1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g044005.1.1

Solyc02g044005.1.1 (Solyc02g044005)


Aliases : Solyc02g044005

Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 170.0)


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g044005.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s02650p00002200 No alias No description available 0.02 OrthoFinder output from all 47 species
Adi_g039306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13043 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g25918 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g34016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14171 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g18243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26034 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g42146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29639.t1 Aspi01Gene29639 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene43510.t1 ORF107E, Aspi01Gene43510 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g24998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_03957 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_07058 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.01 OrthoFinder output from all 47 species
Gb_16691 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_17043 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Pir_g17767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g20023 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g020827.1.1 Solyc11g020827 RNA-directed DNA polymerase homolog OS=Oenothera... 0.01 OrthoFinder output from all 47 species
Tin_g18771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR041577 RT_RNaseH_2 360 453
No external refs found!