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  5. Solyc02g032490.3.1

Solyc02g032490.3.1 (emb1011, Solyc02g032490)


Aliases : emb1011, Solyc02g032490

Description : Nuclear pore complex protein NUP214 OS=Arabidopsis thaliana (sp|f4i1t7|np214_arath : 169.0)


Gene families : OG0003944 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003944_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g032490.3.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00078800 emb1011,... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Adi_g084691 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
Aev_g17047 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.02 OrthoFinder output from all 47 species
Ala_g15272 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.04 OrthoFinder output from all 47 species
Ceric.34G008900.1 Ceric.34G008900 nucleoporin of nuclear pore complex *(NUP214) & original... 0.05 OrthoFinder output from all 47 species
Ceric.34G009300.1 emb1011, Ceric.34G009300 nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
Cre07.g313500 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Lfl_g03504 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.02 OrthoFinder output from all 47 species
MA_903935g0010 No alias Nuclear pore complex protein NUP214 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Mp3g04100.1 emb1011 cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.05 OrthoFinder output from all 47 species
Msp_g31844 No alias nucleoporin of nuclear pore complex *(NUP214) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA

No InterPro domains available for this sequence

No external refs found!