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  5. Solyc02g032450.3.1

Solyc02g032450.3.1 (emb1011, Solyc02g032450)


Aliases : emb1011, Solyc02g032450

Description : cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of nuclear pore complex


Gene families : OG0003944 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003944_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g032450.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g018629 No alias nucleoporin of nuclear pore complex *(NUP214) & original... 0.02 OrthoFinder output from all 47 species
Adi_g084691 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.02 OrthoFinder output from all 47 species
Aev_g17047 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.02 OrthoFinder output from all 47 species
Ala_g15272 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene05038.t1 Aspi01Gene05038 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre07.g313500 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Dcu_g20625 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g32082 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os07g48602.1 LOC_Os07g48602 cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.06 OrthoFinder output from all 47 species
Lfl_g03504 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.06 OrthoFinder output from all 47 species
Mp3g04100.1 emb1011 cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.08 OrthoFinder output from all 47 species
Nbi_g05490 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.02 OrthoFinder output from all 47 species
Ore_g35913 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023982 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
Sam_g08100 No alias nucleoporin of nuclear pore complex *(NUP214) & original... 0.05 OrthoFinder output from all 47 species
Tin_g11192 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e035895_P006 emb1011, Zm00001e035895 cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!