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  5. Solyc02g030633.1.1

Solyc02g030633.1.1 (AFP3, Solyc02g030633)


Aliases : AFP3, Solyc02g030633

Description : transcriptional co-repressor (AFP/NINJA)


Gene families : OG0001010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g030633.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00255370 AFP3,... RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 OrthoFinder output from all 47 species
AT1G69260 AFP1 ABI five binding protein 0.03 OrthoFinder output from all 47 species
AT3G02140 AFP4, TMAC2 AFP2 (ABI five-binding protein 2) family protein 0.05 OrthoFinder output from all 47 species
AT3G29575 AFP3 ABI five binding protein 3 0.08 OrthoFinder output from all 47 species
Aev_g07969 AFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14024 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species
Aev_g20362 NINJA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35216 AFP3 transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species
Ala_g13840 NINJA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18858 AFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24141 AFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22899 AFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08137 AFP4, TMAC2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003927001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.05 OrthoFinder output from all 47 species
GSVIVT01008104001 AFP3 RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 OrthoFinder output from all 47 species
LOC_Os01g68820.1 LOC_Os01g68820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g11550.1 AFP2, LOC_Os03g11550 transcriptional co-repressor (AFP/NINJA) 0.06 OrthoFinder output from all 47 species
Len_g15953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_16384g0010 AFP3 transcriptional co-repressor (AFP/NINJA) 0.07 OrthoFinder output from all 47 species
Msp_g20542 AFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37601 AFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25344 AFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32749 NINJA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02348 AFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g032680.2.1 AFP3, Solyc02g032680 transcriptional co-repressor (AFP/NINJA) 0.08 OrthoFinder output from all 47 species
Solyc02g033020.1.1 Solyc02g033020 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc04g005380.3.1 AFP2, Solyc04g005380 transcriptional co-repressor (AFP/NINJA) 0.05 OrthoFinder output from all 47 species
Spa_g07383 NINJA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e035495_P001 AFP3, Zm00001e035495 transcriptional co-repressor (AFP/NINJA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032308 TDBD 77 112
No external refs found!