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  5. Solyc02g030461.1.1

Solyc02g030461.1.1 (CRK8, Solyc02g030461)


Aliases : CRK8, Solyc02g030461

Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 162.0)


Gene families : OG0000741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000741_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g030461.1.1

Target Alias Description ECC score Gene Family Method Actions
Solyc01g067403.1.1 CRK8, Solyc01g067403 Retrovirus-related Pol polyprotein from transposon RE2... 0.01 OrthoFinder output from all 47 species
Solyc03g062835.1.1 CRK8, Solyc03g062835 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Solyc04g150146.1.1 CRK8, Solyc04g150146 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Solyc05g011883.1.1 CRK8, Solyc05g011883 Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Solyc06g066853.1.1 CRK8, Solyc06g066853 Retrovirus-related Pol polyprotein from transposon RE1... 0.01 OrthoFinder output from all 47 species
Solyc07g019493.1.1 CRK8, Solyc07g019493 Retrovirus-related Pol polyprotein from transposon RE1... 0.01 OrthoFinder output from all 47 species
Solyc08g068717.1.1 CRK8, Solyc08g068717 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Solyc09g015065.1.1 CRK8, Solyc09g015065 Retrovirus-related Pol polyprotein from transposon RE1... 0.01 OrthoFinder output from all 47 species
Solyc09g064165.1.1 ORF240B, Solyc09g064165 Retrovirus-related Pol polyprotein from transposon RE1... 0.01 OrthoFinder output from all 47 species
Solyc09g064243.1.1 CRK8, Solyc09g064243 Uncharacterized mitochondrial protein AtMg00810... 0.01 OrthoFinder output from all 47 species
Solyc11g012815.1.1 ORF240B, Solyc11g012815 Uncharacterized mitochondrial protein AtMg00810... 0.01 OrthoFinder output from all 47 species
Solyc12g040642.1.1 CRK8, Solyc12g040642 Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 186 242
No external refs found!