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  5. Solyc02g014150.4.1

Solyc02g014150.4.1 (HCF136, Solyc02g014150)


Aliases : HCF136, Solyc02g014150

Description : HCF136 protein involved in PS-II assembly


Gene families : OG0006586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g014150.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00083110 HCF136,... Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
AT5G23120 HCF136 photosystem II stability/assembly factor, chloroplast (HCF136) 0.19 OrthoFinder output from all 47 species
Adi_g023753 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Aev_g35613 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Ala_g31805 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Als_g23347 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.1 OrthoFinder output from all 47 species
Aob_g06472 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Aop_g09964 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Aspi01Gene72238.t1 HCF136, Aspi01Gene72238 protein involved in PS-II assembly *(HCF136) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012492 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.05 OrthoFinder output from all 47 species
Cba_g19514 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Ceric.10G037400.1 HCF136, Ceric.10G037400 protein involved in PS-II assembly *(HCF136) & original... 0.2 OrthoFinder output from all 47 species
Cre06.g273700 HCF136 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Dac_g14607 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Dcu_g01147 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Dde_g00586 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Ehy_g20509 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01012045001 HCF136 Photosynthesis.photophosphorylation.photosystem... 0.2 OrthoFinder output from all 47 species
Gb_03750 HCF136 HCF136 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Len_g11400 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.13 OrthoFinder output from all 47 species
Lfl_g02953 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.1 OrthoFinder output from all 47 species
MA_10433328g0010 HCF136 HCF136 protein involved in PS-II assembly 0.13 OrthoFinder output from all 47 species
Mp4g23900.1 HCF136 HCF136 protein involved in PS-II assembly 0.18 OrthoFinder output from all 47 species
Msp_g03512 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.09 OrthoFinder output from all 47 species
Nbi_g14696 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Ore_g40589 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Pir_g10204 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
Pnu_g05859 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Ppi_g00841 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009047 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Sam_g07654 No alias protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Smo227615 HCF136 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Spa_g12995 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.1 OrthoFinder output from all 47 species
Tin_g11749 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.1 OrthoFinder output from all 47 species
Zm00001e030125_P002 HCF136, Zm00001e030125 HCF136 protein involved in PS-II assembly 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 85 384
No external refs found!