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Aliases : HUA2, Solyc02g014115
Description : transcription factor (HUA2)
Gene families : OG0001723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001723_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00100140 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HUA2... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00079800 | HUA2,... | RNA biosynthesis.transcriptional activation.HUA2... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G23150 | HUA2 | Tudor/PWWP/MBT domain-containing protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g018066 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055484 | HUA2 | HUA2-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g055829 | HUA2 | HUA2-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12546 | HUA2 | HUA2-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g15874 | HUA2 | HUA2-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g55257 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024616 | HUA2 | HUA2-type transcription factor & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0119.g046734 | HUA2 | HUA2-type transcription factor & original description: CDS=1-4872 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.33G048700.1 | HUA2, Ceric.33G048700 | HUA2-type transcription factor & original description:... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.36G034600.1 | HUA2, Ceric.36G034600 | HUA2-type transcription factor & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g08999 | No alias | HUA2-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g14860 | HUA2 | HUA2-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g25712 | HUA2 | HUA2-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011100001 | No alias | RNA biosynthesis.transcriptional activation.HUA2... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01012049001 | HUA2 | RNA biosynthesis.transcriptional activation.HUA2... | 0.11 | OrthoFinder output from all 47 species | |
| Gb_39860 | HUA2 | transcription factor (HUA2) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g24339.1 | LOC_Os03g24339 | transcription factor (HUA2) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g46180.1 | LOC_Os07g46180 | transcription factor (HUA2) | 0.1 | OrthoFinder output from all 47 species | |
| Len_g21971 | HUA2 | HUA2-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Len_g53945 | HUA2 | HUA2-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g04290 | HUA2 | HUA2-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_9359526g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g15320.1 | HUA2 | transcription factor (HUA2) | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g08516 | HUA2 | HUA2-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36626 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g27632 | HUA2 | HUA2-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g13849 | HUA2 | HUA2-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13358 | HUA2 | HUA2-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g30186 | No alias | HUA2-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51385 | No alias | HUA2-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo404055 | HUA2 | RNA biosynthesis.transcriptional activation.HUA2... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g10511 | HUA2 | HUA2-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g45552 | HUA2 | HUA2-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11569 | HUA2 | HUA2-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001720_P002 | Zm00001e001720 | transcription factor (HUA2) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e024276_P001 | HUA2, Zm00001e024276 | transcription factor (HUA2) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e029104_P001 | HUA2, Zm00001e029104 | transcription factor (HUA2) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e038169_P004 | Zm00001e038169 | transcription factor (HUA2) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |