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  5. Solyc02g011760.1.1

Solyc02g011760.1.1 (PSAC, Solyc02g011760)


Aliases : PSAC, Solyc02g011760

Description : Photosystem I iron-sulfur center OS=Cucumis sativus (sp|p42046|psac_cucsa : 82.4)


Gene families : OG0010193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g011760.1.1

Target Alias Description ECC score Gene Family Method Actions
ATCG01060 PSAC iron-sulfur cluster binding;electron carriers;4 iron, 4... 0.33 OrthoFinder output from all 47 species
Ceric.05G044000.1 PSAC, Ceric.05G044000 component *(PsaC) of PS-I complex & original... 0.07 OrthoFinder output from all 47 species
Ceric.05G045300.1 PSAC, Ceric.05G045300 component *(PsaC) of PS-I complex & original... 0.07 OrthoFinder output from all 47 species
Ceric.16G017800.1 PSAC, Ceric.16G017800 component *(PsaC) of PS-I complex & original... 0.06 OrthoFinder output from all 47 species
Ceric.18G053500.1 PSAC, Ceric.18G053500 component *(PsaC) of PS-I complex & original... 0.09 OrthoFinder output from all 47 species
Ceric.25G036000.1 PSAC, Ceric.25G036000 component *(PsaC) of PS-I complex & original... 0.18 OrthoFinder output from all 47 species
Ceric.35G068500.1 PSAC, Ceric.35G068500 component *(PsaC) of PS-I complex & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01034636001 PSAC Photosystem I iron-sulfur center OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
LOC_Os06g46436.1 LOC_Os06g46436 component PsaC of PS-I complex 0.3 OrthoFinder output from all 47 species
LOC_Os07g22498.1 LOC_Os07g22498 component PsaC of PS-I complex 0.3 OrthoFinder output from all 47 species
LOC_Os10g21406.1 LOC_Os10g21406 component PsaC of PS-I complex 0.3 OrthoFinder output from all 47 species
Smo137785 PSAC Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR017896 4Fe4S_Fe-S-bd 59 76
No external refs found!