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  5. Solyc02g005600.1.1

Solyc02g005600.1.1 (UBP20, Solyc02g005600)


Aliases : UBP20, Solyc02g005600

Description : Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis thaliana (sp|q9fps7|ubp20_arath : 234.0)


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g005600.1.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g28940.1 UBP17, LOC_Os09g28940 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Ppi_g08304 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g047480.1.1 UBP20, Solyc10g047480 Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 200 412
No external refs found!