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  5. Solyc01g112190.3.1

Solyc01g112190.3.1 (Solyc01g112190)


Aliases : Solyc01g112190

Description : transcription factor (NLP). transcription factor (NIN)


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g112190.3.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00009420 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
AMTR_s00044p00173720 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00148680 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
AT1G64530 No alias Plant regulator RWP-RK family protein 0.02 OrthoFinder output from all 47 species
AT4G35270 No alias Plant regulator RWP-RK family protein 0.03 OrthoFinder output from all 47 species
Ala_g12345 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22686 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10866 NLP7 transcription factor *(NIN) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g32448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G064900.1 Ceric.01G064900 NLP-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.21G019500.1 Ceric.21G019500 transcription factor *(NIN) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.28G047000.1 NLP7, Ceric.28G047000 transcription factor *(NIN) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g10540 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g37710.2 LOC_Os09g37710 transcription factor (NLP). transcription factor (NIN) 0.02 OrthoFinder output from all 47 species
Msp_g25498 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38007 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g22808 No alias transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29513 No alias transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29425 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52865 NLP7 transcription factor *(NIN) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g19464 No alias transcription factor *(NIN) & original description: none 0.01 OrthoFinder output from all 47 species
Smo172537 No alias External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 747 828
IPR003035 RWP-RK_dom 545 592
No external refs found!