Solyc01g111810.3.1 (Solyc01g111810)

Aliases : Solyc01g111810

Description : no hits & (original description: none)

Gene families : OG0001115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001115_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g111810.3.1
Cluster	HCCA: Cluster_248

Target	Alias	Description	ECC score	Gene Family Method
Adi_g017855	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g075192	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g08182	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g70101	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0032.g024712	No alias	not classified & original description: CDS=2-730	0.03	OrthoFinder output from all 47 species
Cba_g00447	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g22059	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.05G101300.1	Ceric.05G101300	not classified & original description: pacid=50577713...	0.03	OrthoFinder output from all 47 species
Dac_g00455	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g32506	No alias	component *(uL18m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Dcu_g08512	No alias	component *(uL18m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01026787001	No alias	No description available	0.05	OrthoFinder output from all 47 species
GSVIVT01031184001	No alias	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Len_g02072	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g09876	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10426381g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g01826	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g42534	No alias	component *(uL18m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Ore_g09894	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g09242	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Ppi_g09449	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g14607	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g00880	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g18854	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g27362	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g29395	No alias	component *(uL18m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Spa_g16236	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Zm00001e015482_P001	Zm00001e015482	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005484	Ribosomal_L18	81	196

External Links

No external refs found!

Solyc01g111810.3.1 (Solyc01g111810)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation