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  5. Solyc01g110370.4.1

Solyc01g110370.4.1 (Solyc01g110370)


Aliases : Solyc01g110370

Description : transcription factor (BBX-DBB)


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g110370.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.08 OrthoFinder output from all 47 species
AT1G06040 STO B-box zinc finger family protein 0.09 OrthoFinder output from all 47 species
AT1G75540 STH2 salt tolerance homolog2 0.03 OrthoFinder output from all 47 species
AT2G21320 No alias B-box zinc finger family protein 0.12 OrthoFinder output from all 47 species
AT2G31380 STH salt tolerance homologue 0.12 OrthoFinder output from all 47 species
Ala_g19677 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14676 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11974 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45209.t1 LZF1, STH3,... BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62651.t1 Aspi01Gene62651 BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0185.g056620 STO BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G005800.1 STO, Ceric.17G005800 BBX class-IV transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ceric.39G035500.1 Ceric.39G035500 BBX class-IV transcription factor & original... 0.1 OrthoFinder output from all 47 species
Dde_g09412 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04609 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26676 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014097001 LZF1, STH3, DBB3 RNA biosynthesis.transcriptional activation.C2C2... 0.06 OrthoFinder output from all 47 species
GSVIVT01018818001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.1 OrthoFinder output from all 47 species
GSVIVT01024173001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.07 OrthoFinder output from all 47 species
GSVIVT01024204001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.07 OrthoFinder output from all 47 species
LOC_Os02g39360.1 STH, LOC_Os02g39360 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g11510.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
LOC_Os09g35880.1 LOC_Os09g35880 transcription factor (BBX-DBB) 0.17 OrthoFinder output from all 47 species
Len_g48954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g01190.1 STO transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Msp_g21663 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02898 No alias BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28592 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10682 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14487 No alias BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27847 No alias BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo111647 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Tin_g09563 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010221_P001 Zm00001e010221 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Zm00001e022915_P001 STO, Zm00001e022915 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Zm00001e023122_P002 STH2, Zm00001e023122 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Zm00001e031265_P001 LZF1, STH3,... transcription factor (BBX-DBB) 0.05 OrthoFinder output from all 47 species
Zm00001e034791_P001 Zm00001e034791 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 52 85
IPR000315 Znf_B-box 3 34
No external refs found!