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  5. Solyc01g110180.4.1

Solyc01g110180.4.1 (Solyc01g110180)


Aliases : Solyc01g110180

Description : transcription factor (BBX-DBB)


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g110180.4.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT2G47890 No alias B-box type zinc finger protein with CCT domain 0.03 OrthoFinder output from all 47 species
AT4G38960 No alias B-box type zinc finger family protein 0.04 OrthoFinder output from all 47 species
Aob_g11974 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01876 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12122 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g45690.1 LOC_Os04g45690 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Nbi_g40701 STH BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g084420.3.1 Solyc02g084420 transcription factor (BBX-DBB) 0.05 OrthoFinder output from all 47 species
Solyc12g005420.2.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 34
IPR000315 Znf_B-box 55 93
No external refs found!