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  5. Solyc01g109850.3.1

Solyc01g109850.3.1 (Solyc01g109850)


Aliases : Solyc01g109850

Description : diaminopimelate decarboxylase


Gene families : OG0004402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004402_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc01g109850.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G14390 No alias Pyridoxal-dependent decarboxylase family protein 0.04 OrthoFinder output from all 47 species
AT5G11880 No alias Pyridoxal-dependent decarboxylase family protein 0.03 OrthoFinder output from all 47 species
Ceric.14G008300.1 Ceric.14G008300 EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.35 No alias Amino acid metabolism.biosynthesis.aspartate... 0.01 OrthoFinder output from all 47 species
Mp1g04250.1 No alias diaminopimelate decarboxylase 0.05 OrthoFinder output from all 47 species
Msp_g05425 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Smo182543 No alias Amino acid metabolism.biosynthesis.aspartate... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR022643 De-COase2_C 344 434
IPR022644 De-COase2_N 97 343
No external refs found!