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  5. Solyc01g108900.4.1

Solyc01g108900.4.1 (Solyc01g108900)


Aliases : Solyc01g108900

Description : LRR-domain extensin


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g108900.4.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00242570 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.05 OrthoFinder output from all 47 species
AMTR_s00029p00242610 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.03 OrthoFinder output from all 47 species
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.04 OrthoFinder output from all 47 species
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT3G19020 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.08 OrthoFinder output from all 47 species
Aob_g05958 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21090 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53230.t1 LRX2, Aspi01Gene53230 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G032400.1 LRX2, Ceric.11G032400 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g10806 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18979 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 OrthoFinder output from all 47 species
Gb_26318 No alias LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os01g25460.1 LOC_Os01g25460 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g35710.1 LOC_Os12g35710 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.02 OrthoFinder output from all 47 species
Nbi_g16811 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13602 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.02 OrthoFinder output from all 47 species
Tin_g08467 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 68 102
No external refs found!