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  5. LOC_Os03g19780.1

LOC_Os03g19780.1


Description : transcription factor (bHLH)


Gene families : OG_01_0001291 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001291_tree ,
OG_02_0000813 (LandPlants) Phylogenetic Tree(s): OG_02_0000813_tree ,
OG_03_0000680 (SeedPlants) Phylogenetic Tree(s): OG_03_0000680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g19780.1
Cluster HCCA: Cluster_381

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00155460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AT3G17100 No alias sequence-specific DNA binding transcription factors 0.04 Archaeplastida
Gb_14677 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os01g14110.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_7709601g0010 No alias No annotation 0.03 Archaeplastida
Solyc01g058670.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e001479_P001 No alias transcription factor (bHLH) 0.08 Archaeplastida
Zm00001e025908_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e035917_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AT1G09250 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
AT3G17100 No alias sequence-specific DNA binding transcription factors 0.03 LandPlants
MA_7709601g0010 No alias No annotation 0.03 LandPlants
Mp5g18820.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc12g042010.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e001479_P001 No alias transcription factor (bHLH) 0.08 LandPlants
Zm00001e025908_P001 No alias transcription factor (bHLH) 0.02 LandPlants
AT1G09250 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 SeedPlants
Zm00001e025908_P001 No alias transcription factor (bHLH) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!