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  5. Solyc01g108070.4.1

Solyc01g108070.4.1 (Solyc01g108070)


Aliases : Solyc01g108070

Description : Protein DJ-1 homolog C OS=Arabidopsis thaliana (sp|q8vy09|dj1c_arath : 474.0)


Gene families : OG0001974 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001974_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g108070.4.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g083201 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g28760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G011200.1 Ceric.27G011200 not classified & original description: pacid=50605217... 0.03 OrthoFinder output from all 47 species
Dcu_g18342 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g23910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031729001 No alias Protein DJ-1 homolog C OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
LOC_Os05g44330.5 LOC_Os05g44330 Protein DJ-1 homolog C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g04208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003791_P002 Zm00001e003791 Protein DJ-1 homolog C OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002818 DJ-1/PfpI 277 437
IPR002818 DJ-1/PfpI 73 237
No external refs found!