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  5. Solyc01g107730.3.1

Solyc01g107730.3.1 (CYCD3, CYCD3;1, Solyc01g107730)


Aliases : CYCD3, CYCD3;1, Solyc01g107730

Description : cyclin (CYCD)


Gene families : OG0000395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g107730.3.1
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AT5G02110 CYCD7;1, CYCD7 CYCLIN D7;1 0.01 OrthoFinder output from all 47 species
Adi_g017234 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ala_g23134 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Aop_g31334 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Aop_g35995 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene22554.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene67685.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene72259.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Cba_g16891 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Dcu_g05427 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01000226001 CYCD3;3 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 OrthoFinder output from all 47 species
GSVIVT01003175001 CYCD3;3 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.06 OrthoFinder output from all 47 species
Gb_37608 ATCYCD2;1, CYCD2;1 cyclin (CYCD) 0.01 OrthoFinder output from all 47 species
Len_g00488 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Len_g03800 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Len_g09718 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Msp_g10139 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Ppi_g10385 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Spa_g04498 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Spa_g11128 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Spa_g28868 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Spa_g38227 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Tin_g46147 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Zm00001e009441_P003 CYCD3, CYCD3;1,... cyclin (CYCD) 0.01 OrthoFinder output from all 47 species
Zm00001e018000_P001 CYCD1;1,... cyclin (CYCD) 0.05 OrthoFinder output from all 47 species
Zm00001e033498_P001 CYCD3;3, Zm00001e033498 cyclin (CYCD) 0.01 OrthoFinder output from all 47 species
Zm00001e035215_P001 CYCD6;1, Zm00001e035215 cyclin (CYCD) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 200 306
IPR006671 Cyclin_N 96 198
No external refs found!