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Aliases : SEP1, Solyc01g107660
Description : SEP1 LHC-related protein
Gene families : OG0007715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007715_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g107660.3.1 | |
| Cluster | HCCA: Cluster_133 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G34190 | SEP1 | stress enhanced protein 1 | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g007325 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g20676 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g00643 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g11480 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0179.g056293 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.10G038300.1 | SEP1, Ceric.10G038300 | light-responsive regulatory protein *(SEP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g05406 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g21079 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g49815 | No alias | light-responsive regulatory protein *(SEP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g20814 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06382 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003167001 | SEP1 | Photosynthesis.photophosphorylation.photosystem... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_32155 | SEP1 | SEP1 LHC-related protein | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g40600.1 | LOC_Os11g40600 | SEP1 LHC-related protein | 0.07 | OrthoFinder output from all 47 species | |
| Len_g04986 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g06407 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.07 | OrthoFinder output from all 47 species | |
| MA_10425860g0010 | SEP1 | SEP1 LHC-related protein | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g06770.1 | NPQ4, PSBS | SEP1 LHC-related protein | 0.16 | OrthoFinder output from all 47 species | |
| Msp_g01373 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60841 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01617 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g00094 | SEP1 | light-responsive regulatory protein *(SEP1) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e004851_P001 | SEP1, Zm00001e004851 | SEP1 LHC-related protein | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |