Solyc01g107510.3.1 (REV1, ATREV1, Solyc01g107510)

Aliases : REV1, ATREV1, Solyc01g107510

Description : DNA polymerase (REV1)

Gene families : OG0005198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005198_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g107510.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00167p00024400	REV1, ATREV1,...	DNA damage response.DNA repair polymerase activities.DNA...	0.04	OrthoFinder output from all 47 species
Cre12.g550800	REV1, ATREV1	DNA damage response.DNA repair polymerase activities.DNA...	0.01	OrthoFinder output from all 47 species
MA_93316g0010	REV1, ATREV1	DNA repair protein REV1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003684	damaged DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0008289	lipid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001357	BRCT_dom	28	115
IPR017961	DNA_pol_Y-fam_little_finger	557	679
IPR001126	UmuC	324	470

External Links

No external refs found!

Solyc01g107510.3.1 (REV1, ATREV1, Solyc01g107510)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation