Solyc01g106410.3.1 (Solyc01g106410)

Aliases : Solyc01g106410

Description : Putative disease resistance protein RGA1 OS=Solanum bulbocastanum (sp|q7xa42|rga1_solbu : 515.0)

Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g106410.3.1
Cluster	HCCA: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01001448001	No alias	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum	0.02	OrthoFinder output from all 47 species
GSVIVT01001459001	No alias	Putative disease resistance RPP13-like protein 1...	0.1	OrthoFinder output from all 47 species
GSVIVT01028665001	No alias	No description available	0.2	OrthoFinder output from all 47 species
GSVIVT01032204001	No alias	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum	0.02	OrthoFinder output from all 47 species
GSVIVT01034675001	No alias	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
GSVIVT01036660001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01036767001	No alias	Putative disease resistance RPP13-like protein 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01037447001	No alias	Putative disease resistance protein At3g14460...	0.03	OrthoFinder output from all 47 species
LOC_Os01g20720.1	LOC_Os01g20720	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species
LOC_Os05g41290.1	LOC_Os05g41290	Disease resistance protein RGA2 OS=Solanum bulbocastanum...	0.03	OrthoFinder output from all 47 species
Solyc02g084450.4.1	Solyc02g084450	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
Zm00001e027057_P001	Zm00001e027057	Putative disease resistance RPP13-like protein 1...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	172	392
IPR041118	Rx_N	9	98

External Links

No external refs found!

Solyc01g106410.3.1 (Solyc01g106410)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation