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  5. Solyc01g105680.4.1

Solyc01g105680.4.1 (RPT3, NPH3, JK218,...)


Aliases : RPT3, NPH3, JK218, Solyc01g105680

Description : component NPH3 of CUL3-BTB E3 ubiquitin ligase complex


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g105680.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00096710 NPY2,... BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene41127.t1 Aspi01Gene41127 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Dcu_g07068 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
LOC_Os02g38120.1 LOC_Os02g38120 BTB/POZ domain-containing protein At1g67900... 0.04 OrthoFinder output from all 47 species
LOC_Os03g10800.2 NPY2, LOC_Os03g10800 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os09g09370.2 LOC_Os09g09370 BTB/POZ domain-containing protein At5g47800... 0.04 OrthoFinder output from all 47 species
Len_g16088 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Lfl_g10716 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Nbi_g01322 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000950 No alias not classified & original description: CDS=1-2517 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021263 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g12100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g013570.3.1 Solyc05g013570 BTB/POZ domain-containing protein At1g67900... 0.03 OrthoFinder output from all 47 species
Zm00001e033674_P003 Zm00001e033674 BTB/POZ domain-containing protein At5g47800... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 228 516
IPR000210 BTB/POZ_dom 46 131
No external refs found!