1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g105300.4.1

Solyc01g105300.4.1 (AtMC3, MC3, Solyc01g105300)


Aliases : AtMC3, MC3, Solyc01g105300

Description : MCP1 programmed cell death metacaspase-like regulator


Gene families : OG0001440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001440_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g105300.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00201610 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.04 OrthoFinder output from all 47 species
Azfi_s0182.g056416 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
GSVIVT01015724001 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.04 OrthoFinder output from all 47 species
Len_g50239 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.04 OrthoFinder output from all 47 species
MA_191850g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g27899 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Zm00001e037976_P001 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.06 OrthoFinder output from all 47 species
Zm00001e037977_P002 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!