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  5. Solyc01g105060.3.1

Solyc01g105060.3.1 (Solyc01g105060)


Aliases : Solyc01g105060

Description : hydroxyacyl-ACP dehydratase (ptHD)


Gene families : OG0004877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g105060.3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00201890 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.07 OrthoFinder output from all 47 species
AT2G22230 No alias Thioesterase superfamily protein 0.1 OrthoFinder output from all 47 species
AT5G10160 No alias Thioesterase superfamily protein 0.1 OrthoFinder output from all 47 species
Ala_g06777 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51334 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09110 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010821 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original... 0.03 OrthoFinder output from all 47 species
Ceric.28G048200.1 Ceric.28G048200 hydroxyacyl-ACP dehydratase *(ptHD)) & original... 0.09 OrthoFinder output from all 47 species
Cre03.g208050 No alias Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.02 OrthoFinder output from all 47 species
Dcu_g00444 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00398 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01029788001 No alias Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.04 OrthoFinder output from all 47 species
LOC_Os08g12840.1 LOC_Os08g12840 hydroxyacyl-ACP dehydratase (ptHD) 0.07 OrthoFinder output from all 47 species
Len_g13375 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g24451 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g04910.1 No alias hydroxyacyl-ACP dehydratase (ptHD) 0.07 OrthoFinder output from all 47 species
Msp_g12188 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10556 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c24_9920V3.1 Pp3c24_9920 Thioesterase superfamily protein 0.01 OrthoFinder output from all 47 species
Spa_g08885 No alias hydroxyacyl-ACP dehydratase *(ptHD)) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021571_P001 Zm00001e021571 hydroxyacyl-ACP dehydratase (ptHD) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR013114 FabA_FabZ 91 216
No external refs found!