Solyc01g104680.4.1 (RAN2, Solyc01g104680)

Aliases : RAN2, Solyc01g104680

Description : Ran GTPase

Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g104680.4.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g016130	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g054056	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g13007	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g38517	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g27243	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g03752	RAN2	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g45894	RAN2	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.10G019400.1	RAN3, ATRAN3,...	GTPase *(Ran) & original description: pacid=50612012...	0.04	OrthoFinder output from all 47 species
Dcu_g28223	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01035805001	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.05	OrthoFinder output from all 47 species
Lfl_g22288	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g02691	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g14641	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Smo270966	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.04	OrthoFinder output from all 47 species
Spa_g05239	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g24079	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g03127	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004618	phosphoglycerate kinase activity	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:0070569	uridylyltransferase activity	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	15	171

External Links

No external refs found!

Solyc01g104680.4.1 (RAN2, Solyc01g104680)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation