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  5. Solyc01g103220.3.1

Solyc01g103220.3.1 (CYTC-2, Solyc01g103220)


Aliases : CYTC-2, Solyc01g103220

Description : cytochrome c protein


Gene families : OG0001135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g103220.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G22840 ATCYTC-A, CYTC-1 CYTOCHROME C-1 0.08 OrthoFinder output from all 47 species
Adi_g086974 ATCYTC-A, CYTC-1 cytochrome c protein & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g093122 CYTC-2 cytochrome c protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G058600.1 ATCYTC-A,... cytochrome c protein & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000737.37 ATCYTC-A, CYTC-1 Cellular respiration.oxidative... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66180.1 CYTC-2, LOC_Os01g66180 cytochrome c protein 0.03 OrthoFinder output from all 47 species
LOC_Os05g34770.1 CYTC-2, LOC_Os05g34770 cytochrome c protein 0.03 OrthoFinder output from all 47 species
Lfl_g16128 CYTC-2 cytochrome c protein & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g15050.1 ATCYTC-A, CYTC-1 cytochrome c protein 0.06 OrthoFinder output from all 47 species
Msp_g29444 CYTC-2 cytochrome c protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02074 CYTC-2 cytochrome c protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00036 CYTC-2 cytochrome c protein & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e027037_P001 CYTC-2, Zm00001e027037 cytochrome c protein 0.04 OrthoFinder output from all 47 species
Zm00001e031700_P003 CYTC-2, Zm00001e031700 cytochrome c protein 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR009056 Cyt_c-like_dom 13 109
No external refs found!